8#ifndef SRC_APPS_CHEM_OEP_H_
9#define SRC_APPS_CHEM_OEP_H_
55 double r = refdens(
IND);
70 return std::vector<Tensor<double> > (1,U);
81 static constexpr char const *
tag =
"oep";
84 initialize<std::vector<std::string> >(
"model",{
"dcep"},
"comment on this: oaep ocep dcep mrks");
85 initialize<unsigned int>(
"maxiter",150,
"maximum number of iterations in OEP algorithm");
86 initialize<bool>(
"restart",
false,
"restart from previous OEP calculation");
87 initialize<bool>(
"no_compute",
false,
"read from previous OEP calculation, no computation");
88 initialize<double>(
"levelshift",0.0,
"shift occupied orbital energies in the BSH operator");
90 initialize<double>(
"density_threshold_high",1.e-6,
"comment on this");
91 initialize<double>(
"density_threshold_low",1.e-8,
"comment on this");
92 initialize<double>(
"density_threshold_inv",1.e-9,
"comment on this");
93 initialize<std::vector<double> >(
"kain_param",{1.0e-8, 3.0},
"comment on this");
96 initialize<unsigned int>(
"saving_amount",0,
"choose level 0, 1, 2 or 3 for saving functions");
97 initialize<unsigned int>(
"save_iter_orbs",0,
"if > 0 save all orbitals every ... iterations (needs a lot of storage!");
98 initialize<unsigned int>(
"save_iter_density",0,
"if > 0 save KS density every ... iterations");
99 initialize<unsigned int>(
"save_iter_IKS",0,
"if > 0 save IKS every ... iterations");
100 initialize<unsigned int>(
"save_iter_kin_tot_KS",0,
"if > 0 save kin_tot_KS every ... iterations");
101 initialize<unsigned int>(
"save_iter_kin_P_KS",0,
"if > 0 save kin_P_KS every ... iterations");
102 initialize<unsigned int>(
"save_iter_corrections",0,
"if > 0 save OEP correction(s) every ... iterations");
103 initialize<unsigned int>(
"save_iter_effective_potential",0,
"if > 0 save effective potential every ... iterations");
115 set_derived_value(
"density_threshold_low",0.01*get<double>(
"density_threshold_high"));
119 set_derived_value(
"density_threshold_inv",0.1*get<double>(
"density_threshold_low"));
122 print(
"levelshift > 0.0 in oep parameters\n\n");
128 std::vector<std::string>
model()
const {
return get<std::vector<std::string> >(
"model");}
130 bool restart()
const {
return get<bool>(
"restart");}
132 unsigned int maxiter()
const {
return get<unsigned int>(
"maxiter");}
133 double levelshift()
const {
return get<double>(
"levelshift");}
138 unsigned int saving_amount()
const {
return get<unsigned int>(
"saving_amount");}
141 std::vector<double>
kain_param()
const {
return get<std::vector<double> >(
"kain_param");}
167 std::vector<std::string> convergence_crit=
param.
get<std::vector<std::string> >(
"convergence_criteria");
168 if (std::find(convergence_crit.begin(),convergence_crit.end(),
"each_energy")==convergence_crit.end()) {
169 convergence_crit.push_back(
"each_energy");
172 calc->param.set_derived_value(
"convergence_criteria",convergence_crit);
187 std::vector<std::string> convergence_crit=
param.
get<std::vector<std::string> >(
"convergence_criteria");
188 if (std::find(convergence_crit.begin(),convergence_crit.end(),
"each_energy")==convergence_crit.end()) {
189 convergence_crit.push_back(
"each_energy");
192 calc->param.set_derived_value(
"convergence_criteria",convergence_crit);
195 auto ref=std::make_shared<Nemo>(
world,parser);
196 ref->param.set_derived_value(
"convergence_criteria",convergence_crit);
197 ref->get_calc()->param.set_derived_value(
"convergence_criteria",convergence_crit);
203 std::string
name()
const {
return "oep";}
207 print(
"The oep code computes local exchange potentials based on a Hartree-Fock calculation from nemo");
208 print(
"oep --print_parameters\n");
209 print(
"You can perform a simple calculation by running\n");
210 print(
"oep --geometry=h2o.xyz\n");
211 print(
"provided you have an xyz file in your directory.");
217 print(
"default parameters for the oep program are");
219 print(
"\n\nthe molecular geometry must be specified in a separate block:");
232 for (
auto w : what) {
234 else if (
w==
"reference")
reference->param.print(
"dft");
245 return value(
calc->molecule.get_all_coords());
298 return (model==
"ocep") or (model==
"dcep") or (model==
"mrks");
302 return (model==
"dcep");
306 return (model==
"mrks");
311 for (
long i = orbens.
size() - 1; i >= 0; i--) {
312 printf(
" e%2.2lu = %12.8f Eh\n", i, orbens(i));
330 double Drho = rho_diff.
trace();
338 K.set_bra_and_ket(
R_square * nemo, nemo);
356 std::vector<real_function_3d> args={
R_square*rho,numerator,rho,zero,
one,lra};
384 for (
int idim=0; idim<3; ++idim) {
389 std::vector<real_function_3d> dnemo=
apply(
world,
D,nemo_copy);
390 u1dnterm+=U1[idim]*
dot(
world,nemo_copy,dnemo);
407 std::vector<vecfuncT> grad_nemo(nemo.size());
408 for (
size_t i = 0; i < nemo.size(); i++) {
413 else grad_nemo[i] =
grad(nemo_copy[i]);
417 for (
size_t i = 0; i < nemo.size(); i++) {
418 for (
size_t j = i + 1; j < nemo.size(); j++) {
419 vecfuncT tmp = nemo[i]*grad_nemo[j] - nemo[j]*grad_nemo[i];
420 grad_nemo_term.push_back(
dot(
world, tmp, tmp));
442 if (fockKS.
normf()<1.e-10) {
448 auto [eval, evec] =
syev(fockKS);
449 double homoKS = -eval.max();
451 auto [eval1, evec1] =
syev(fockHF);
452 double homoHF = -eval1.max();
454 double longrange=homoHF-homoKS;
457 for (
int i=0; i<fock1.
dim(0); ++i) fock1(i,i)-=longrange;
470 std::vector<real_function_3d> args={densityKS,ocep_numerator_HF,densityHF,
471 numeratorKS,densityKS,lra_func};
506 std::vector<real_function_3d> args={densityKS,dcep_numerator_HF,densityHF,
507 numeratorKS,densityKS,lra_func};
533 std::vector<real_function_3d> args={densityKS,mrks_numerator_HF,densityHF,
534 numeratorKS,densityKS,lra_func};
539 op.square_denominator=
true;
582 auto monomial_x = [] (
const coord_3d& r) {
return r[0];};
583 auto monomial_y = [] (
const coord_3d& r) {
return r[1];};
584 auto monomial_z = [] (
const coord_3d& r) {
return r[2];};
601 double Ex = -1.0*
inner(
world, phi, Kphi).sum();
624 const double E_nuc =
calc->molecule.nuclear_repulsion_energy();
625 double energy = E_kin + E_ext + E_J + E_X + E_nuc;
628 printf(
"\n kinetic energy %15.8f Eh\n", E_kin);
629 printf(
" electron-nuclear attraction energy %15.8f Eh\n", E_ext);
630 printf(
" Coulomb energy %15.8f Eh\n", E_J);
631 printf(
" exchange energy %15.8f Eh\n", E_X);
632 printf(
" nuclear-nuclear repulsion energy %15.8f Eh\n", E_nuc);
633 printf(
" total energy %15.8f Eh\n\n",
energy);
635 return {
energy,E_kin,E_ext,E_J,E_X};
648 for (
long i = 0; i < eigvals.
size(); i++) {
659 const double E_J =
inner(
world, phi, Jphi).sum();
660 const double E_K =
inner(
world, phi, Kphi).sum();
661 const double E_Vx =
inner(
world, phi, Vx*phi).sum();
662 printf(
" E_J = %15.8f Eh\n", E_J);
663 printf(
" E_K = %15.8f Eh\n", E_K);
664 printf(
" E_Vx = %15.8f Eh\n", E_Vx);
665 const double E_nuc =
calc->molecule.nuclear_repulsion_energy();
667 double E_1 = -1.0*(E_J + E_K + 2.0*E_Vx) + E_nuc;
double w(double t, double eps)
Definition DKops.h:22
Operators for the molecular HF and DFT code.
long dim(int i) const
Returns the size of dimension i.
Definition basetensor.h:147
long size() const
Returns the number of elements in the tensor.
Definition basetensor.h:138
Definition SCFOperators.h:334
Function< T, NDIM > compute_potential(const Function< T, NDIM > &density) const
given a density compute the Coulomb potential
Definition SCFOperators.h:432
const real_function_3d & potential() const
getter for the Coulomb potential
Definition SCFOperators.h:421
Implements derivatives operators with variety of boundary conditions on simulation domain.
Definition derivative.h:266
Definition SCFOperators.h:104
Exchange & set_bra_and_ket(const vecfuncT &bra, const vecfuncT &ket)
Definition SCFOperators.cc:712
T trace() const
Returns global value of int(f(x),x) ... global comm required.
Definition mra.h:1154
bool compressed
Definition mra.h:1168
Key is the index for a node of the 2^NDIM-tree.
Definition key.h:69
static void print_parameters()
Definition molecule.cc:115
real_function_3d R_square
the square of the nuclear correlation factor
Definition nemo.h:319
double compute_kinetic_energy(const std::vector< Function< T, NDIM > > &nemo) const
compute kinetic energy as square of the "analytical" expectation value
Definition nemo.h:183
World & world
Definition nemo.h:310
The Nemo class.
Definition nemo.h:326
void set_protocol(const double thresh)
adapt the thresholds consistently to a common value
Definition nemo.h:631
std::shared_ptr< SCF > get_calc() const
Definition nemo.h:496
NemoCalculationParameters param
Definition nemo.h:585
const NemoCalculationParameters & get_param() const
Definition nemo.h:498
std::shared_ptr< SCF > calc
Definition nemo.h:582
void load_mos(World &w)
Definition nemo.h:412
Molecule & molecule()
return a reference to the molecule
Definition nemo.h:506
functor for a local U1 dot U1 potential
Definition correlationfactor.h:532
Definition SCFOperators.h:455
OEP_Parameters(World &world, const commandlineparser &parser)
Definition oep.h:106
static constexpr char const * tag
Definition oep.h:81
std::vector< std::string > model() const
Definition oep.h:128
unsigned int maxiter() const
Definition oep.h:132
double dens_thresh_inv() const
Definition oep.h:137
bool restart() const
Definition oep.h:130
OEP_Parameters(const OEP_Parameters &other)=default
bool no_compute() const
Definition oep.h:131
unsigned int save_iter_corrections() const
Definition oep.h:139
void set_derived_values(const Nemo::NemoCalculationParameters &nparam)
Definition oep.h:113
unsigned int saving_amount() const
Definition oep.h:138
double dens_thresh_hi() const
Definition oep.h:135
OEP_Parameters()
Definition oep.h:83
std::vector< double > kain_param() const
Definition oep.h:141
double levelshift() const
Definition oep.h:133
double dens_thresh_lo() const
Definition oep.h:136
bool selftest()
The following function tests all essential parts of the OEP program qualitatively and some also quant...
Definition madness/chem/oep.cc:402
bool need_mrks_correction(const std::string &model) const
Definition oep.h:305
void set_reference(const std::shared_ptr< Nemo > reference1)
Definition oep.h:223
OEP_Parameters oep_param
parameters for this OEP calculation
Definition oep.h:151
static void help()
Definition oep.h:205
double compute_exchange_energy_vir(const vecfuncT &nemo, const real_function_3d Vx) const
compute Evir using Levy-Perdew virial relation (Kohut_2014, (43) or Ospadov_2017, (25))
Definition oep.h:579
real_function_3d compute_total_kinetic_density(const vecfuncT &nemo) const
compute the total kinetic energy density of equation (6) from Kohut
Definition oep.h:369
void save_restartdata(const Tensor< double > &fock) const
Definition madness/chem/oep.cc:84
virtual std::shared_ptr< Fock< double, 3 > > make_fock_operator() const
the OEP Fock operator is the HF Fock operator without exchange but with the OEP
Definition madness/chem/oep.cc:132
Tensor< double > compute_fock_diagonal_elements(const Tensor< double > &KS_eigvals, const vecfuncT &phi, const vecfuncT &Kphi, const real_function_3d &Vx) const
compute diagonal elements of Fock matrix
Definition oep.h:640
double compute_and_print_final_energies(const std::string model, const real_function_3d &Voep, const vecfuncT &KS_nemo, const tensorT &KS_Fock, const vecfuncT &HF_nemo, const tensorT &HF_Fock) const
Definition madness/chem/oep.cc:140
double compute_exchange_energy_conv(const vecfuncT phi, const vecfuncT Kphi) const
compute exchange energy using the expectation value of the exchange operator
Definition oep.h:599
double compute_delta_rho(const real_function_3d rho_HF, const real_function_3d rho_KS) const
compute Delta rho as an indicator for the result's quality
Definition oep.h:327
void print_parameters(std::vector< std::string > what) const
Definition oep.h:231
void compute_nemo_potentials(const vecfuncT &nemo, vecfuncT &Jnemo, vecfuncT &Unemo) const
compute all potentials from given nemos except kinetic energy
Definition oep.h:546
real_function_3d compute_slater_potential(const vecfuncT &nemo) const
compute Slater potential (Kohut, 2014, equation (15))
Definition oep.h:335
virtual double value()
Definition oep.h:244
bool need_dcep_correction(const std::string &model) const
Definition oep.h:301
real_function_3d compute_energy_weighted_density_local(const vecfuncT &nemo, const tensorT &fock) const
return without the NCF and factor 2 for closed shell !
Definition oep.h:486
real_function_3d compute_mrks_correction(const real_function_3d &mrks_numerator_HF, const vecfuncT &nemoHF, const vecfuncT &nemoKS) const
compute correction of the given model
Definition oep.h:518
std::tuple< Tensor< double >, vecfuncT > recompute_HF(const vecfuncT &HF_nemo) const
Definition madness/chem/oep.cc:120
std::string name() const
Definition oep.h:203
virtual double value(const Tensor< double > &x)
Should return the value of the objective function.
Definition oep.h:252
double compute_E_first(const vecfuncT phi, const vecfuncT Jphi, const vecfuncT Kphi, const real_function_3d Vx) const
compute E^(1) = 1/2*\sum_ij <ij||ij> - \sum_i <i|J + Vx|i> = \sum_i <i|- 0.5*J - 0....
Definition oep.h:656
real_function_3d compute_Pauli_kinetic_density(const vecfuncT &nemo) const
compute the Pauli kinetic energy density divided by the density tau_P/rho with equation (16) from Osp...
Definition oep.h:402
OEP(World &world, const OEP_Parameters &oepparam, const std::shared_ptr< const Nemo > &reference)
Definition oep.h:161
double iterate(const std::string model, const vecfuncT &HF_nemo, const tensorT &HF_eigvals, vecfuncT &KS_nemo, tensorT &KS_Fock, real_function_3d &Voep, const real_function_3d Vs) const
Definition madness/chem/oep.cc:214
void compute_coulomb_potential(const vecfuncT &nemo, vecfuncT &Jnemo) const
compute Coulomb potential
Definition oep.h:558
std::shared_ptr< const Nemo > get_reference() const
Definition oep.h:227
void print_orbens(const tensorT orbens) const
print orbital energies in reverse order with optional shift
Definition oep.h:310
void load_restartdata(Tensor< double > &fock)
Definition madness/chem/oep.cc:102
double compute_E_zeroth(const tensorT eigvals) const
cumpute E^(0) = \sum_i \epsilon_i^KS
Definition oep.h:646
real_function_3d compute_density(const vecfuncT &nemo) const
compute density from orbitals with ragularization (Bischoff, 2014_1, equation (19))
Definition oep.h:321
static void print_parameters()
Definition oep.h:215
real_function_3d get_final_potential() const
Definition oep.h:240
real_function_3d Vfinal
the final local potential
Definition oep.h:157
std::shared_ptr< const Nemo > reference
the wave function reference that determines the local potential
Definition oep.h:154
OEP(World &world, const commandlineparser &parser)
Definition oep.h:182
void analyze()
Definition madness/chem/oep.cc:67
void compute_exchange_potential(const vecfuncT &nemo, vecfuncT &Knemo) const
compute exchange potential (needed for Econv)
Definition oep.h:569
void output_calc_info_schema(const double &energy) const
update the json file with calculation input and output
Definition madness/chem/oep.cc:58
std::vector< double > compute_energy(const vecfuncT &nemo, const double E_X) const
Definition oep.h:608
bool need_ocep_correction(const std::string &model) const
Definition oep.h:297
real_function_3d compute_dcep_correction(const real_function_3d &dcep_numerator_HF, const vecfuncT &nemoHF, const vecfuncT &nemoKS) const
compute correction of the given model
Definition oep.h:492
real_function_3d compute_ocep_correction(const real_function_3d &ocep_numerator_HF, const vecfuncT &nemoHF, const vecfuncT &nemoKS, const tensorT &fockHF, const tensorT &fockKS) const
compute correction of the given model
Definition oep.h:438
double solve(const vecfuncT &HF_nemo)
Definition madness/chem/oep.cc:22
class for holding the parameters for calculation
Definition QCCalculationParametersBase.h:294
virtual void read_input_and_commandline_options(World &world, const commandlineparser &parser, const std::string tag)
Definition QCCalculationParametersBase.h:328
T get(const std::string key) const
Definition QCCalculationParametersBase.h:302
void print(const std::string header="", const std::string footer="") const
print all parameters
Definition QCCalculationParametersBase.cc:22
void set_derived_value(const std::string &key, const T &value)
Definition QCCalculationParametersBase.h:406
virtual real_function_3d density() const
Definition QCPropertyInterface.h:25
A tensor is a multidimensional array.
Definition tensor.h:317
float_scalar_type normf() const
Returns the Frobenius norm of the tensor.
Definition tensor.h:1726
Tensor< T > & fill(T x)
Inplace fill with a scalar (legacy name)
Definition tensor.h:562
A parallel world class.
Definition world.h:132
ProcessID rank() const
Returns the process rank in this World (same as MPI_Comm_rank()).
Definition world.h:320
double(* energy)()
Definition derivatives.cc:58
static double lo
Definition dirac-hatom.cc:23
real_function_3d mask
Definition dirac-hatom.cc:27
vecfuncT K(vecfuncT &ket, vecfuncT &bra, vecfuncT &vf)
Tensor< double > op(const Tensor< double > &x)
Definition kain.cc:508
#define MADNESS_EXCEPTION(msg, value)
Macro for throwing a MADNESS exception.
Definition madness_exception.h:119
#define MADNESS_CHECK_THROW(condition, msg)
Check a condition — even in a release build the condition is always evaluated so it can have side eff...
Definition madness_exception.h:207
Namespace for all elements and tools of MADNESS.
Definition DFParameters.h:10
void print_header2(const std::string &s)
medium section heading
Definition print.cc:54
double abs(double x)
Definition complexfun.h:48
Function< T, NDIM > square(const Function< T, NDIM > &f, bool fence=true)
Create a new function that is the square of f - global comm only if not reconstructed.
Definition mra.h:2746
std::vector< Function< T, NDIM > > grad_bspline_one(const Function< T, NDIM > &f, bool refine=false, bool fence=true)
Definition vmra.h:2093
void truncate(World &world, response_space &v, double tol, bool fence)
Definition basic_operators.cc:31
std::vector< Function< TENSOR_RESULT_TYPE(T, R), NDIM > > transform(World &world, const std::vector< Function< T, NDIM > > &v, const Tensor< R > &c, bool fence=true)
Transforms a vector of functions according to new[i] = sum[j] old[j]*c[j,i].
Definition vmra.h:707
std::vector< Function< T, NDIM > > multi_to_multi_op_values(const opT &op, const std::vector< Function< T, NDIM > > &vin, const bool fence=true)
apply op on the input vector yielding an output vector of functions
Definition vmra.h:1882
FunctionFactory< double, 3 > real_factory_3d
Definition functypedefs.h:108
void print(const T &t, const Ts &... ts)
Print items to std::cout (items separated by spaces) and terminate with a new line.
Definition print.h:225
response_space apply(World &world, std::vector< std::vector< std::shared_ptr< real_convolution_3d > > > &op, response_space &f)
Definition basic_operators.cc:43
void refine(World &world, const std::vector< Function< T, NDIM > > &vf, bool fence=true)
refine the functions according to the autorefine criteria
Definition vmra.h:196
Function< TENSOR_RESULT_TYPE(T, R), NDIM > dot(World &world, const std::vector< Function< T, NDIM > > &a, const std::vector< Function< R, NDIM > > &b, bool fence=true)
Multiplies and sums two vectors of functions r = \sum_i a[i] * b[i].
Definition vmra.h:1565
double inner(response_space &a, response_space &b)
Definition response_functions.h:640
vector< functionT > vecfuncT
Definition corepotential.cc:58
void refine_to_common_level(World &world, std::vector< Function< T, NDIM > > &vf, bool fence=true)
refine all functions to a common (finest) level
Definition vmra.h:206
std::vector< Function< T, NDIM > > grad(const Function< T, NDIM > &f, bool refine=false, bool fence=true)
shorthand gradient operator
Definition vmra.h:2033
void save(const Function< T, NDIM > &f, const std::string name)
Definition mra.h:2835
Function< T, NDIM > copy(const Function< T, NDIM > &f, const std::shared_ptr< WorldDCPmapInterface< Key< NDIM > > > &pmap, bool fence=true)
Create a new copy of the function with different distribution and optional fence.
Definition mra.h:2066
void syev(const Tensor< T > &A, Tensor< T > &V, Tensor< typename Tensor< T >::scalar_type > &e)
Real-symmetric or complex-Hermitian eigenproblem.
Definition lapack.cc:969
Definition test_ar.cc:204
double econv() const
Definition CalculationParameters.h:145
int nalpha() const
Definition CalculationParameters.h:166
std::string dft_deriv() const
Definition CalculationParameters.h:198
int nbeta() const
Definition CalculationParameters.h:167
double lo() const
Definition CalculationParameters.h:181
class holding parameters for a nemo calculation beyond the standard dft parameters from moldft
Definition nemo.h:333
very simple command line parser
Definition commandlineparser.h:15
Class to compute terms of the potential.
Definition oep.h:21
double log_high
Definition oep.h:26
std::vector< Tensor< double > > operator()(const Key< 3 > &key, const std::vector< Tensor< double > > &t) const
Definition oep.h:39
double log_low
Definition oep.h:26
bool square_denominator
Definition oep.h:27
std::size_t get_result_size() const
Definition oep.h:33
double eps_regularize
Definition oep.h:25
divide_add_interpolate(double hi, double lo, double eps_regularize)
Definition oep.h:29
double thresh_high
Definition oep.h:23
double thresh_low
Definition oep.h:24
Definition dirac-hatom.cc:108
#define ITERATOR(t, exp)
Definition tensor_macros.h:249
#define IND
Definition tensor_macros.h:204
AtomicInt sum
Definition test_atomicint.cc:46
constexpr coord_t one(1.0)