DFParameters.h

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/// \file DFParameters
/// \brief Input parameters for a Dirac Fock calculation.
 
#ifndef MADNESS_APPS_DFPARAMS_H_INCLUDED
#define MADNESS_APPS_DFPARAMS_H_INCLUDED
 
#include <madness/chem/molecule.h>
#include <filesystem>
#include <cctype>
#include <string>
 
namespace madness {
 
     /// Clean archive name by stripping 5-digit rank suffix (.00000) if present,
     /// and appending .restartdata if only the base prefix was specified.
     inline std::string clean_archive_filename(std::string name) {
          if (name.empty()) return name;
          // Trim whitespace
          const auto first = name.find_first_not_of(" \t\n\r");
          if (first == std::string::npos) return "";
          const auto last = name.find_last_not_of(" \t\n\r");
          name = name.substr(first, (last - first + 1));
 
          // Strip 5-digit chunk suffix (.00000, etc.) if provided
          if (name.size() > 6 && name[name.size() - 6] == '.') {
               bool all_digits = true;
               for (size_t i = name.size() - 5; i < name.size(); ++i) {
                    if (!std::isdigit(static_cast<unsigned char>(name[i]))) {
                         all_digits = false;
                         break;
                    }
               }
               if (all_digits) {
                    name.erase(name.size() - 6);
               }
          }
          // If name.00000 doesn't exist, but name.restartdata.00000 exists, append .restartdata
          if (!std::filesystem::exists(name + ".00000") && std::filesystem::exists(name + ".restartdata.00000")) {
               name += ".restartdata";
          }
          return name;
     }
 
     struct DFParameters{
          // List of input parameters
          //!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
          //!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
          //               If you add something here, don't forget to add it to serializable!
          //!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
          //!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
          std::string archive;         ///< Name of input archive to read in ground state
          int job;                     ///< Indicates the type of job to do
                                       ///<   Values |   Job
                                       ///<   --------------------------------------------------------------
                                       ///<     0    |   Dirac Fock on occupied orbitals only (Default)
                                       ///<   --------------------------------------------------------------
                                       ///<     Add more values here
                                       ///<
          int max_iter;                ///< Maximum number of iterations
          double small;                ///< Minimum length scale to be resolved
          double thresh;               ///< Accuracy criterion when truncating
          double dconv;                ///< Accuracy criterion for charge density. Defaults to thresh.
          int k;                       ///< Number of legendre polynomials in scaling basis
          bool kain;                   ///< Turns on KAIN nonlinear solver 
          int maxsub;                  ///< Sets maximum subspace size for KAIN
          double maxrotn;              ///< maximum step allowed by kain
          bool restart;                ///< Indicates this is a restarted DF job
          int nucleus;                 ///< Indicates which nucleus model to use (1 for fermi, anything else for Gaussian)
          bool do_save;                ///< Whether or not to save after each iteration. Defaults to true. Turn off with 'no_save'
          std::string savefile;        ///< Gives the file to save the archive each iteration Default: DFrestartdata (in working directory)
          int lb_iter;                 ///< How many iterations to load balance (after the initial load balancing)
          bool nwchem;                 ///< Indicates archive given is actually an nwchem file for starting the job
          bool lineplot;               ///< Whether or not to make lineplots at the end of the job
          bool no_compute;             ///< If true, will skip all computation
          double bohr_rad;             ///< bohr radius in fm (default: 52917.7210544 CODATA2022) 
          double speed_of_light;       ///< speed_of_light in au (default: 137.03599917697017 CODATA2022)
          int min_iter;                ///< minimum number of iterations (default: 2)
          bool Krestricted;            ///< Calculation should be performed in Kramers-restricted manner (default: false)
          //!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
          //!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
          //               If you add something here, don't forget to add it to serializable!
          //!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
          //!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
 
          template<typename Archive>
          void serialize(Archive& ar){
               ar & archive & job & max_iter & small & thresh & dconv & k & kain & maxsub & maxrotn & restart & nucleus & do_save & savefile & lb_iter & nwchem & lineplot & no_compute & bohr_rad & speed_of_light & min_iter & Krestricted;
          }
 
          // Default constructor
          DFParameters()
          : job(0)
          , max_iter(20)
          , small(1e-5)
          , thresh(1e-6)
          , dconv(1e-6)
          , k(8)
          , kain(false)
          , maxsub(10)
          , maxrotn(0.25)
          , restart(false)
          , nucleus(0)
          , do_save(true)
          , savefile("DFrestartdata")
          , lb_iter(20)
          , nwchem(false)
          , lineplot(false)
          , no_compute(false)
          , bohr_rad(52917.7210544)  // bohr radius in fm from CODATA 2022
          , speed_of_light(137.03599917697017) // speed of light in atomic units from CODATA 2022
          , min_iter(2)
          , Krestricted(false)
          {}
 
          // Initializes DFParameters using the contents of file \c filename
          void read_file(const std::string& filename){
               std::ifstream f(filename.c_str());
               read(f);
          }
 
          // Initializes DFParameters using the contents of stream \c f
          void read(std::istream& f){
               position_stream(f, "DiracFock");
               std::string s;
 
               while(f >> s){
                    if(s == "end"){
                         break;
                    }
                    else if (s[0] == '#'){
                         std::string dummy;
                         std::getline(f, dummy);
                         continue;
                    }
                    else if (s == "archive"){
                         f >> archive;
                         archive = clean_archive_filename(archive);
                    }
                    else if (s == "job"){
                         f >> job;
                    }
                    else if (s == "max_iter"){
                         f >> max_iter;
                    }
                    else if (s == "small"){
                         f >> small;
                    }
                    else if (s == "thresh"){
                         f >> thresh;
                         dconv = thresh;
                    }
                    else if (s == "dconv"){
                         f >> dconv;
                    }
                    else if (s == "k"){
                         f >> k;
                    }
                    else if (s == "kain"){
                         kain = true;
                    }
                    else if (s == "maxsub"){
                         f >> maxsub;
                    }
                    else if (s == "maxrotn"){
                         f >> maxrotn;
                    }
                    else if (s == "restart"){
                         restart = true;
                    }
                    else if (s == "nucleus"){
                         f >> nucleus;
                    }
                    else if (s == "no_save"){
                         do_save = false;
                    }
                    else if (s == "savefile"){
                         f >> savefile;
                         savefile = clean_archive_filename(savefile);
                    }
                    else if (s == "lb_iter"){
                         f >> lb_iter;
                    }
                    else if (s == "nwchem"){
                         nwchem = true;
                    }
                    else if (s == "lineplot"){
                         lineplot = true;
                    }
                    else if (s == "no_compute"){
                         no_compute = true;
                    }
                    else if (s == "bohr_rad"){
                         f >> bohr_rad;
                    }
                    else if (s == "speed_of_light"){
                         f >> speed_of_light;
                    }
                    else if (s == "min_iter"){
                         f >> min_iter;
                    }
                    else if (s == "Krestricted"){
                         Krestricted = true;
                    }
                    else{
                       std::cout << "Dirac Fock: unrecognized input keyword " << s << std::endl;
                       MADNESS_EXCEPTION("input error", 0); 
                    }
               }
          } // end read()
 
          // Prints all information
          void print_params() const{
               madness::print("\n   Input Dirac Fock Parameters");
               madness::print("   -------------------------");
               madness::print("            Initial Guess File:", archive);
               madness::print("                           Job:", job);
               madness::print("          Refinement Threshold:", thresh);
               madness::print("                             k:", k);
               madness::print("Smallest Resolved Length Scale:", small);
               madness::print("             Bohr radius in fm:", bohr_rad);
               madness::print("          Speed of light in au:", speed_of_light);
               madness::print("                Max Iterations:", max_iter);
               madness::print("               Use KAIN Solver:", kain);
               if(kain) madness::print("     KAIN Solver Subspace Size:", maxsub);
               madness::print("                          Save:", do_save);
               madness::print("                     save file:", savefile);
               if(nucleus == 1){
                    madness::print("                       Nucleus: fermi");
               }
               else if (nucleus == 2) {
                    madness::print("                       Nucleus: point");
               }
               else{
                    madness::print("                       Nucleus: gaussian");
               }
               madness::print("           Kramers restriction:", Krestricted);
               madness::print("                  Do Lineplots:", lineplot);
          }
     };
 
}
#endif
 
//kthxbye